STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA69408.1Putative stress-responsive transcriptional regulator; PFAM: PspC domain. (68 aa)    
Predicted Functional Partners:
AGA68668.1
Phage shock protein A (IM30), suppresses sigma54-dependent transcription; PFAM: PspA/IM30 family.
  
 
 0.585
AGA68671.1
Phage shock protein A (IM30), suppresses sigma54-dependent transcription; PFAM: PspA/IM30 family.
  
 
 0.585
AGA68144.1
Hypothetical protein.
  
 
 0.581
AGA70425.1
PFAM: Membrane protein of unknown function.
  
    0.568
AGA70675.1
PAS/PAC sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold.
   
 
 0.545
AGA69407.1
PFAM: Coat F domain.
       0.512
AGA69409.1
Transposase; Required for the transposition of the insertion element.
  
    0.429
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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