STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69418.1Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family. (100 aa)    
Predicted Functional Partners:
AGA69419.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1294).
       0.774
AGA68707.1
Hypothetical protein.
  
     0.595
AGA70437.1
Hypothetical protein.
  
     0.593
AGA69787.1
Hypothetical protein.
  
     0.580
AGA69499.1
Hypothetical protein.
  
     0.578
AGA70538.1
PFAM: MazG nucleotide pyrophosphohydrolase domain.
  
     0.566
AGA67835.1
PFAM: Nucleotidyltransferase domain.
  
     0.560
AGA67644.1
PFAM: Spore cortex protein YabQ (Spore_YabQ).
  
     0.541
ribBA
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.521
AGA70022.1
Hypothetical protein.
  
     0.517
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.