Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA69456.1Hypothetical protein; PFAM: Radical SAM superfamily. (440 aa)    
Predicted Functional Partners:
AGA68396.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.794
AGA70702.1
PFAM: DMSO reductase anchor subunit (DmsC).
 
     0.776
AGA70704.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.768
AGA70705.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.768
AGA68484.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.762
AGA68520.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.758
AGA68522.1
PFAM: DMSO reductase anchor subunit (DmsC).
 
     0.758
AGA68523.1
PFAM: DMSO reductase anchor subunit (DmsC).
 
     0.756
AGA70350.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.750
AGA68767.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.743
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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