Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69522.1PFAM: SpoVR like protein. (454 aa)    
Predicted Functional Partners:
AGA69523.1
Sporulation protein YhbH; PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH; Belongs to the UPF0229 family.
 
  
 0.994
AGA69524.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
 
  
 0.994
AGA69521.1
Putative membrane-associated protein; PFAM: SNARE associated Golgi protein.
  
    0.684
AGA69002.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1508).
   
  
 0.632
AGA70808.1
Sporulation transcriptional regulator SpoIIID; PFAM: Stage III sporulation protein D.
   
  
 0.507
AGA69807.1
PFAM: Bacillus/Clostridium GerA spore germination protein.
  
   
 0.498
AGA67597.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
   
  
 0.438
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.