STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69556.1PFAM: Predicted metal-binding protein (DUF2103). (196 aa)    
Predicted Functional Partners:
AGA69557.1
TIGRFAM: phosphoesterase, MJ0936 family.
       0.793
AGA69558.1
Arabinose efflux permease family protein; PFAM: Bacterial protein of unknown function (DUF894).
       0.773
AGA70532.1
PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.744
AGA69554.1
Uncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein.
       0.714
AGA69555.1
Hypothetical protein.
       0.714
AGA69360.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.643
AGA70895.1
Hypothetical protein.
  
     0.629
AGA69860.1
PFAM: Stage III sporulation protein AF (Spore_III_AF).
  
     0.620
AGA70633.1
Cell wall-binding protein; PFAM: Transglycosylase SLT domain; Putative cell wall binding repeat 2.
  
     0.617
AGA68703.1
PFAM: Protein of unknown function DUF88.
 
     0.615
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.