Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGA69584.1PFAM: Late competence development protein ComFB. (89 aa)    
Predicted Functional Partners:
AGA70798.1
Putative amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
  
  
 0.938
AGA70467.1
PFAM: rod shape-determining protein MreD.
  
     0.652
AGA70799.1
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein); PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
  
  
 0.621
AGA69577.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.592
AGA70527.1
Sporulation/spore germination protein; PFAM: Sporulation and spore germination.
  
     0.587
AGA67653.1
PFAM: Bacterial protein of unknown function (DUF881).
  
     0.546
AGA67630.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.524
AGA70437.1
Hypothetical protein.
  
     0.522
AGA69864.1
PFAM: Stage III sporulation protein AB (spore_III_AB).
 
     0.515
AGA70538.1
PFAM: MazG nucleotide pyrophosphohydrolase domain.
  
     0.510
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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