STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69606.1Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG. (161 aa)    
Predicted Functional Partners:
AGA70895.1
Hypothetical protein.
  
     0.594
AGA70231.1
Beta-galactosidase/beta-glucuronidase; PFAM: domain.
  
     0.575
AGA70770.1
ABC-type sugar transport system, periplasmic component.
  
 
   0.566
AGA69360.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.525
AGA69710.1
Plasmid segregation actin-type ATPase ParM.
  
    0.518
AGA69528.1
Hypothetical protein.
  
     0.507
AGA68916.1
Sec-independent protein secretion pathway component; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB.
  
     0.498
AGA70747.1
Squalene cyclase.
  
     0.497
AGA69869.1
Putative glycosyl hydrolase; PFAM: LysM domain.
  
    0.495
AGA69605.1
PFAM: Bacterial regulatory proteins, tetR family.
       0.491
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.