STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69610.1Dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19). (316 aa)    
Predicted Functional Partners:
AGA68586.1
Putative glutamine amidotransferase; PFAM: Peptidase C26.
     0.914
AGA69609.1
Putative metal-dependent phosphoesterase, PHP family; PFAM: PHP domain.
       0.774
AGA69611.1
PFAM: Stage V sporulation protein S (SpoVS).
       0.673
AGA69608.1
PFAM: Aminotransferase class I and II.
     
 0.661
AGA69612.1
PFAM: Calcineurin-like phosphoesterase; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family.
       0.527
AGA68687.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family.
 
     0.498
rny
Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
       0.442
AGA69604.1
L-aminopeptidase/D-esterase; PFAM: Peptidase family S58.
 
     0.439
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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