Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA69703.1Putative membrane protein; PFAM: Protein of unknown function (DUF421). (232 aa)    
Predicted Functional Partners:
AGA69702.1
Hypothetical protein.
 
     0.874
AGA69794.1
PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ.
  
     0.711
AGA69712.1
PFAM: Bacillus/Clostridium GerA spore germination protein.
 
   
 0.634
AGA69711.1
Germination protein, Ger(X)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
 
  
 0.615
AGA69809.1
PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD.
 
  
 0.614
AGA69808.1
PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE.
 
  
 0.595
AGA69810.1
PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC.
 
  
 0.595
AGA69758.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.572
AGA67599.1
PFAM: Bacillus/Clostridium GerA spore germination protein.
 
   
 0.570
AGA68160.1
PFAM: Bacillus/Clostridium GerA spore germination protein.
 
   
 0.543
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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