STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69720.1PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (473 aa)    
Predicted Functional Partners:
AGA70547.1
PAS domain S-box; PFAM: Stage II sporulation protein E (SpoIIE); PAS fold.
 
 0.795
AGA70513.1
HD-GYP domain-containing protein; PFAM: HD domain.
 
   0.695
AGA70501.1
HD-GYP domain-containing protein; PFAM: HD domain.
 
   0.643
AGA68672.1
Putative domain HDIG-containing protein; PFAM: HD domain.
 
 
 0.586
AGA70237.1
HD-GYP domain-containing protein; PFAM: HD domain.
  
   0.553
AGA68848.1
HD-GYP domain-containing protein; PFAM: HD domain.
 
   0.548
AGA69064.1
PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
0.536
AGA68329.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; PFAM: EAL domain; GGDEF domain; PAS fold.
 
 
0.517
AGA67842.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; PFAM: HAMP domain; HD domain; Cache domain; GGDEF domain; PAS fold.
 
 
0.512
AGA67901.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; PFAM: GGDEF domain; PAS fold.
 
 
0.512
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.