STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69787.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
AGA69788.1
Hypothetical protein.
 
     0.766
AGA69499.1
Hypothetical protein.
  
     0.744
AGA68707.1
Hypothetical protein.
  
     0.632
AGA69418.1
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family.
  
     0.580
AGA69316.1
PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.577
AGA70511.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
  
     0.555
AGA69905.1
PFAM: Protein of unknown function (DUF1292); Belongs to the UPF0473 family.
  
     0.536
AGA69560.1
PFAM: Protein of unknown function, DUF606.
  
     0.512
AGA69607.1
Hypothetical protein.
  
     0.510
AGA68057.1
PFAM: Protein of unknown function (DUF2922).
  
     0.492
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.