Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69795.1PFAM: Protein of unknown function (DUF2953). (215 aa)    
Predicted Functional Partners:
AGA69794.1
PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ.
  
    0.799
AGA69790.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.765
AGA69913.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.749
AGA69801.1
Hypothetical protein.
 
     0.712
AGA70782.1
Hypothetical protein.
  
     0.694
AGA67600.1
Spore germination protein, amino acid permease; PFAM: Spore germination protein.
  
    0.692
AGA70770.1
ABC-type sugar transport system, periplasmic component.
  
     0.673
AGA67630.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.661
AGA69871.1
Competence protein A.
  
     0.660
AGA68145.1
Hypothetical protein.
  
     0.635
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.