Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA69897.1Prepilin-type N-terminal cleavage/methylation domain-containing protein; PFAM: Prokaryotic N-terminal methylation motif. (165 aa)    
Predicted Functional Partners:
AGA69899.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
 
 
 0.944
AGA69898.1
Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.941
AGA69893.1
Tfp pilus assembly protein, ATPase PilM; PFAM: Competence protein A.
 
  
 0.775
AGA69875.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein.
 
 
 0.767
AGA69874.1
Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.733
AGA69900.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; PFAM: Prokaryotic N-terminal methylation motif.
 
     0.664
AGA69896.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.649
AGA69895.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; PFAM: Prokaryotic N-terminal methylation motif.
       0.645
AGA69894.1
PFAM: Bacterial Ig-like domain (group 2); Carbohydrate binding domain.
       0.636
AGA70428.1
PFAM: Competence protein; Metallo-beta-lactamase superfamily.
 
  
 0.626
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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