STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA70241.1PFAM: Acetyltransferase (GNAT) family. (145 aa)    
Predicted Functional Partners:
AGA70782.1
Hypothetical protein.
  
     0.734
AGA69788.1
Hypothetical protein.
  
    0.696
AGA69790.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.678
AGA69871.1
Competence protein A.
  
     0.673
AGA69505.1
Putative aminopeptidase; PFAM: Peptidase family M28.
 
     0.671
AGA70391.1
Hypothetical protein.
  
     0.633
AGA69528.1
Hypothetical protein.
  
     0.603
AGA69620.1
Hypothetical protein.
  
     0.588
AGA70770.1
ABC-type sugar transport system, periplasmic component.
  
   
 0.587
AGA68145.1
Hypothetical protein.
  
    0.578
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.