Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70314.1PFAM: Glycosyl transferase family 2. (643 aa)    
Predicted Functional Partners:
AGA70313.1
Hypothetical protein.
 
  
 0.732
AGA70028.1
NHLM bacteriocin system ABC transporter, ATP-binding protein; PFAM: ABC transporter transmembrane region; ABC transporter.
  
  
 0.635
AGA70029.1
NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family.
  
  
 0.635
AGA68977.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
  
 0.630
AGA70315.1
Flagellin/flagellar hook associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
     
 0.612
AGA70312.1
PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.512
AGA70610.1
Undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase.
 
  
 0.473
AGA70310.1
Mannosyltransferase OCH1-like enzyme; PFAM: Glycosyltransferase sugar-binding region containing DXD motif.
  
  
 0.444
AGA70309.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein C-terminal.
  
  
 0.434
AGA70311.1
4-diphosphocytidyl-2-methyl-D-erythritol synthase; PFAM: Uncharacterized protein family UPF0007; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
       0.419
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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