STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70443.1Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. (251 aa)    
Predicted Functional Partners:
AGA70442.1
Coenzyme F390 synthetase; PFAM: AMP-binding enzyme.
 
     0.792
AGA69292.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase.
 
     0.747
AGA69289.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase.
 
     0.738
AGA70444.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like.
       0.732
AGA69290.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase.
 
     0.717
AGA70441.1
Coenzyme F390 synthetase; PFAM: AMP-binding enzyme.
 
     0.694
AGA70445.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
       0.636
AGA70446.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.607
AGA70447.1
Hypothetical protein.
       0.460
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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