STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA70546.1Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (152 aa)    
Predicted Functional Partners:
AGA70547.1
PAS domain S-box; PFAM: Stage II sporulation protein E (SpoIIE); PAS fold.
 
 
 0.987
AGA70545.1
Anti-sigma-factor antagonist; PFAM: STAS domain; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.955
AGA68106.1
PFAM: Golgi phosphoprotein 3 (GPP34).
 
 
 0.889
AGA70257.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.820
AGA70283.1
Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain.
   
    0.820
flgK
Flagellar hook-associated protein FlgK; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein.
   
    0.820
AGA70261.1
PFAM: Flagellar hook-length control protein FliK.
  
    0.778
AGA70518.1
PFAM: Tripartite tricarboxylate transporter TctB family.
  
     0.739
AGA67633.1
Hypothetical protein.
  
     0.735
AGA69555.1
Hypothetical protein.
  
     0.732
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.