STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA70553.1Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2. (1464 aa)    
Predicted Functional Partners:
AGA68389.1
Hypothetical protein.
  
     0.625
AGA68383.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
  
     0.567
AGA68954.1
PFAM: Protein of unknown function (DUF3102).
  
     0.524
AGA69412.1
Hypothetical protein.
  
     0.505
AGA70552.1
Hypothetical protein; PFAM: Fic/DOC family.
       0.504
AGA67935.1
Hypothetical protein.
  
     0.462
AGA68960.1
Glycopeptide antibiotics resistance protein; PFAM: VanZ like family.
  
     0.440
AGA69860.1
PFAM: Stage III sporulation protein AF (Spore_III_AF).
  
     0.421
AGA69710.1
Plasmid segregation actin-type ATPase ParM.
  
     0.412
AGA70532.1
PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.411
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.