STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA70633.1Cell wall-binding protein; PFAM: Transglycosylase SLT domain; Putative cell wall binding repeat 2. (585 aa)    
Predicted Functional Partners:
AGA70231.1
Beta-galactosidase/beta-glucuronidase; PFAM: domain.
  
    0.789
AGA70770.1
ABC-type sugar transport system, periplasmic component.
  
     0.762
AGA70532.1
PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.757
AGA69869.1
Putative glycosyl hydrolase; PFAM: LysM domain.
  
    0.747
AGA69360.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.740
AGA69528.1
Hypothetical protein.
  
     0.733
AGA69815.1
Putative CoA-binding protein.
  
     0.720
AGA70895.1
Hypothetical protein.
  
     0.707
AGA70437.1
Hypothetical protein.
  
     0.703
AGA69507.1
Hypothetical protein.
  
     0.701
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.