Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70659.1Transcriptional regulator; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family. (206 aa)    
Predicted Functional Partners:
AGA70658.1
PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
  
 0.654
AGA70646.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.642
AGA68415.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.637
AGA70660.1
Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
  
 0.593
AGA70661.1
Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
  
    0.486
AGA69605.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.472
AGA70657.1
acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.404
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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