STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70701.1Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component. (384 aa)    
Predicted Functional Partners:
AGA70700.1
CoA-substrate-specific enzyme activase, putative; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
 
 0.966
AGA68254.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 
 
 0.895
AGA68251.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 
 
 0.892
AGA70699.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
 
     0.886
AGA68246.1
CoA-substrate-specific enzyme activase, putative; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
 
 0.836
AGA68247.1
benzoyl-CoA reductase (2-electron) alpha subunit; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
 
 0.832
AGA70510.1
CoA-substrate-specific enzyme activase, putative; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
 
 
 0.814
AGA70698.1
PFAM: Protein of unknown function (DUF3343).
       0.781
AGA70717.1
Selenium metabolism protein YedF; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
    0.770
AGA70385.1
PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix.
  
     0.646
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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