Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
AGA70716.1PFAM: Protein of unknown function (DUF3343). (85 aa)    
Predicted Functional Partners:
AGA70717.1
Selenium metabolism protein YedF; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
   
 0.848
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
       0.633
AGA69019.1
Hypothetical protein.
  
     0.537
AGA70715.1
Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
       0.518
AGA70714.1
Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family.
       0.488
AGA70719.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
 
   
 0.484
AGA69139.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.472
AGA69017.1
Hypothetical protein; PFAM: Predicted metallopeptidase (DUF2201).
  
     0.448
AGA70672.1
Putative selenium-dependent hydroxylase accessory protein YqeC.
 
   
 0.412
AGA69018.1
PFAM: ATPase family associated with various cellular activities (AAA).
  
     0.407
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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