Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70768.1Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (457 aa)    
Predicted Functional Partners:
AGA70769.1
Putative P-loop-containing kinase; Displays ATPase and GTPase activities.
  
  
 0.981
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
  
 0.926
AGA70766.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain.
       0.810
AGA70770.1
ABC-type sugar transport system, periplasmic component.
     
 0.732
AGA70764.1
Phosphate uptake regulator; PFAM: PhoU domain.
 
     0.644
AGA70771.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
       0.604
AGA70765.1
Hypothetical protein.
       0.590
AGA70763.1
Na+/phosphate symporter; PFAM: Na+/Pi-cotransporter; PhoU domain; manually curated.
       0.576
AGA69802.1
PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
  
     0.569
AGA70249.1
Transcriptional attenuator, LytR family; PFAM: Cell envelope-related transcriptional attenuator domain.
  
     0.538
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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