Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70770.1ABC-type sugar transport system, periplasmic component. (393 aa)    
Predicted Functional Partners:
AGA70782.1
Hypothetical protein.
 
  
 0.800
AGA69528.1
Hypothetical protein.
  
 
   0.785
AGA70231.1
Beta-galactosidase/beta-glucuronidase; PFAM: domain.
 
     0.781
AGA70532.1
PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.773
AGA67644.1
PFAM: Spore cortex protein YabQ (Spore_YabQ).
  
     0.772
AGA69869.1
Putative glycosyl hydrolase; PFAM: LysM domain.
  
     0.772
AGA69871.1
Competence protein A.
  
     0.772
AGA70437.1
Hypothetical protein.
  
     0.771
AGA68703.1
PFAM: Protein of unknown function DUF88.
  
     0.770
AGA70747.1
Squalene cyclase.
  
     0.770
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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