STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA70783.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
AGA70424.1
PFAM: Stage II sporulation protein P (SpoIIP).
  
     0.756
AGA70239.1
Putative Zn-dependent protease-like protein; PFAM: Putative modulator of DNA gyrase.
 
     0.745
AGA69710.1
Plasmid segregation actin-type ATPase ParM.
  
     0.743
AGA70616.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2.
  
     0.715
AGA70204.1
Hypothetical protein.
  
     0.696
AGA70240.1
Putative Zn-dependent protease-like protein; PFAM: Putative modulator of DNA gyrase.
 
     0.691
AGA69091.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.684
AGA67644.1
PFAM: Spore cortex protein YabQ (Spore_YabQ).
  
     0.679
AGA68351.1
Hypothetical protein.
 
     0.679
AGA70261.1
PFAM: Flagellar hook-length control protein FliK.
  
     0.662
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.