Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70857.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
AGA70858.1
Spore cortex-lytic enzyme; PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase.
 
  
 0.980
AGA70211.1
Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.771
AGA70537.1
PFAM: Cell Wall Hydrolase; LysM domain.
 
  
 0.769
AGA69826.1
Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
   
 0.751
AGA67601.1
Germination protein, Ger(X)C family; PFAM: Spore germination B3/ GerAC like, C-terminal.
 
   
 0.746
AGA69711.1
Germination protein, Ger(X)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
 
   
 0.746
AGA67648.1
PFAM: Stage II sporulation protein E (SpoIIE).
  
     0.731
AGA70400.1
PFAM: Putative stage IV sporulation protein YqfD.
  
   
 0.697
AGA70770.1
ABC-type sugar transport system, periplasmic component.
  
     0.679
AGA70856.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1934).
 
     0.674
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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