Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA70906.1Putative membrane protein. (343 aa)    
Predicted Functional Partners:
AGA70907.1
Putative sporulation protein YyaC; PFAM: Protein of unknown function (DUF1256).
 
    0.753
AGA67709.1
PFAM: YtxC-like family.
 
     0.729
AGA67600.1
Spore germination protein, amino acid permease; PFAM: Spore germination protein.
  
     0.605
AGA67601.1
Germination protein, Ger(X)C family; PFAM: Spore germination B3/ GerAC like, C-terminal.
  
    0.589
AGA70903.1
PFAM: Tetratricopeptide repeat.
       0.566
AGA70904.1
Hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain.
       0.566
hypA-2
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.566
AGA69702.1
Hypothetical protein.
  
    0.560
AGA68932.1
Putative membrane protein.
  
     0.518
AGA69861.1
PFAM: Stage III sporulation protein AE (spore_III_AE).
  
    0.510
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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