STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF07028.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)    
Predicted Functional Partners:
AHF08294.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.974
AHF06801.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.958
AHF07366.1
Chemotaxis protein CheY; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
  
 0.939
AHF06730.1
Chemotaxis protein CheY; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
  
 0.937
AHF06091.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.792
AHF06253.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.779
AHF06119.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.771
AHF07705.1
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.765
AHF05980.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.759
AHF07557.1
PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.757
Your Current Organism:
Desulfitobacterium metallireducens
NCBI taxonomy Id: 871968
Other names: D. metallireducens DSM 15288, Desulfitobacterium metallireducens 853-15A, Desulfitobacterium metallireducens ATCC BAA-636, Desulfitobacterium metallireducens DSM 15288, Desulfitobacterium metallireducens str. DSM 15288, Desulfitobacterium metallireducens strain DSM 15288
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