Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF07433.1 | AHF07434.1 | DESME_10605 | DESME_10650 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
| AHF07433.1 | AHF08630.1 | DESME_10605 | DESME_10610 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.578 |
| AHF07433.1 | AHF08631.1 | DESME_10605 | DESME_10615 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.534 |
| AHF07433.1 | AHF08632.1 | DESME_10605 | DESME_10620 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.584 |
| AHF07433.1 | AHF08633.1 | DESME_10605 | DESME_10625 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.471 |
| AHF07433.1 | AHF08634.1 | DESME_10605 | DESME_10630 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.471 |
| AHF07433.1 | AHF08635.1 | DESME_10605 | DESME_10635 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.444 |
| AHF07433.1 | AHF08636.1 | DESME_10605 | DESME_10640 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.444 |
| AHF07433.1 | AHF08637.1 | DESME_10605 | DESME_10645 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.419 |
| AHF07434.1 | AHF07433.1 | DESME_10650 | DESME_10605 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.439 |
| AHF07434.1 | AHF07435.1 | DESME_10650 | DESME_10655 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| AHF07434.1 | AHF08630.1 | DESME_10650 | DESME_10610 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.739 |
| AHF07434.1 | AHF08631.1 | DESME_10650 | DESME_10615 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.552 |
| AHF07434.1 | AHF08632.1 | DESME_10650 | DESME_10620 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.840 |
| AHF07434.1 | AHF08633.1 | DESME_10650 | DESME_10625 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.618 |
| AHF07434.1 | AHF08634.1 | DESME_10650 | DESME_10630 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.618 |
| AHF07434.1 | AHF08635.1 | DESME_10650 | DESME_10635 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.794 |
| AHF07434.1 | AHF08636.1 | DESME_10650 | DESME_10640 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.794 |
| AHF07434.1 | AHF08637.1 | DESME_10650 | DESME_10645 | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.911 |
| AHF07435.1 | AHF07434.1 | DESME_10655 | DESME_10650 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
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