STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1K9N2Uncharacterized protein. (1244 aa)    
Predicted Functional Partners:
A0A4Z1L464
Uncharacterized protein.
    
 0.806
A0A4Z1KA99
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.759
A0A4Z1L6R6
Uncharacterized protein.
    
 0.618
A0A4Z1KPT8
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.590
A0A4Z1KW92
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.584
A0A4Z1K723
Uncharacterized protein.
    
  0.569
A0A4Z1KUI0
Uncharacterized protein.
    
 0.566
A0A4Z1L3D5
Uncharacterized protein.
    
  0.563
A0A4Z1K7S7
Uncharacterized protein.
    
  0.559
A0A4Z1KGE9
Uncharacterized protein.
    
  0.559
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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