STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1KC11Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
A0A4Z1L1S6
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.894
A0A4Z1KVC2
Ribosomal_L23eN domain-containing protein.
   
   0.888
A0A4Z1L664
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.888
A0A4Z1KRH4
WD_REPEATS_REGION domain-containing protein.
    
   0.885
A0A4Z1KLP2
Ribosomal_L18_c domain-containing protein.
   
   0.884
A0A4Z1KTB5
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.882
A0A4Z1KLJ0
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
   0.881
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.881
A0A4Z1KGL1
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.878
A0A4Z1KZC2
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.878
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.