STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1KF09Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
A0A4Z1KSD9
Peptidylprolyl isomerase.
    
   0.721
A0A4Z1KAN9
Uncharacterized protein.
   
   0.553
A0A4Z1KTB5
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.540
A0A4Z1KVC2
Ribosomal_L23eN domain-containing protein.
    
   0.540
A0A4Z1L664
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.540
A0A4Z1KGL1
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
   0.534
A0A4Z1KIZ8
Uncharacterized protein.
   
    0.533
A0A4Z1K6Y6
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.527
A0A4Z1KLP2
Ribosomal_L18_c domain-containing protein.
    
   0.509
A0A4Z1KSG1
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
    0.497
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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