STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1KLR6Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
A0A4Z1KUC8
CLP1_P domain-containing protein.
  
 0.979
A0A4Z1K5Q0
WD_REPEATS_REGION domain-containing protein.
   
 0.864
A0A4Z1L1N4
Ipi1_N domain-containing protein.
   
 0.813
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.758
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
  0.718
A0A4Z1KGM4
CP-type G domain-containing protein.
   
 
  0.708
A0A4Z1KPC5
Uncharacterized protein.
   
 
  0.708
A0A4Z1KCS3
Lactamase_B domain-containing protein.
 
      0.695
A0A4Z1KLJ6
Uncharacterized protein.
   
  0.692
A0A4Z1KVR2
ULP_PROTEASE domain-containing protein.
   
  0.692
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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