STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1KPD5RRM domain-containing protein. (339 aa)    
Predicted Functional Partners:
A0A4Z1K8N2
Uncharacterized protein.
    
 0.999
A0A4Z1K777
RRM domain-containing protein.
    
 0.998
A0A4Z1KSU4
Uncharacterized protein.
   
 0.998
A0A4Z1KS25
Pinin_SDK_memA domain-containing protein.
   
 0.997
A0A4Z1L4J3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.993
A0A4Z1KKB6
PWI domain-containing protein.
    
 0.992
A0A4Z1KEK5
RRM domain-containing protein.
   
 0.987
A0A4Z1L500
Uncharacterized protein.
   
 
  0.981
A0A4Z1KSU1
Uncharacterized protein.
    
 0.968
A0A4Z1L673
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
   0.948
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.