STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1KSP8RBR-type E3 ubiquitin transferase. (339 aa)    
Predicted Functional Partners:
A0A4Z1KM93
Ubiquitin-like domain-containing protein.
    
 0.698
A0A4Z1KWJ6
Ubiquitin-like domain-containing protein.
    
 0.698
A0A4Z1KVL5
RING-type domain-containing protein.
    
 0.697
A0A4Z1KHR2
Uncharacterized protein.
    
 0.694
A0A4Z1KKV7
Uncharacterized protein.
    
  0.677
A0A4Z1KSF3
RRN7-type domain-containing protein.
    
  0.677
A0A4Z1KTY3
Uncharacterized protein.
    
  0.677
A0A4Z1L1A8
HECT domain-containing protein.
   
 
 0.671
A0A4Z1KGV0
Uncharacterized protein.
    
  0.644
A0A4Z1KIS8
CIA30 domain-containing protein.
    
  0.644
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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