STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1KTP3Uncharacterized protein. (735 aa)    
Predicted Functional Partners:
A0A4Z1L5Z0
Spindle pole body component.
    
  0.741
A0A4Z1KIT4
Spindle pole body component.
    
 0.695
A0A4Z1KJV4
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.670
A0A4Z1KN85
Spindle pole body component.
    
 0.655
A0A4Z1KBA8
Spindle pole body component.
    
 0.644
A0A4Z1KN62
Spindle pole body component.
    
 0.644
A0A4Z1KZQ6
Uncharacterized protein.
    
 0.644
A0A4Z1KD67
Uncharacterized protein.
    
 0.618
A0A4Z1L4L3
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.610
A0A4Z1KRE2
Nucleoside diphosphate kinase.
    
 0.598
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.