STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1KV23Uncharacterized protein. (394 aa)    
Predicted Functional Partners:
A0A4Z1L464
Uncharacterized protein.
    
 0.806
A0A4Z1KA99
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.759
A0A4Z1KWG2
Uncharacterized protein; Belongs to the actin family.
    
 0.651
A0A4Z1KW92
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.646
A0A4Z1KWH3
YL1_C domain-containing protein.
    
 0.629
A0A4Z1L6R6
Uncharacterized protein.
    
 0.618
A0A4Z1KQV7
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.592
A0A4Z1KPT8
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.590
A0A4Z1K723
Uncharacterized protein.
    
  0.569
A0A4Z1KUI0
Uncharacterized protein.
    
 0.566
Your Current Organism:
Botrytis porri
NCBI taxonomy Id: 87229
Other names: B. porri, Botryotinia porri, Botrytis porri N.F.Buchw., CBS 190.26, MUCL 3234
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