STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL88233.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
KPL88660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.787
KPL89246.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.753
KPL88231.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
KPL88232.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
KPL90233.1
Nucleotidyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.639
KPL87917.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
  0.634
rlmI-2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
KPL88230.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
rfbD
Hypothetical protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.563
KPL88478.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.535
Your Current Organism:
Ardenticatena maritima
NCBI taxonomy Id: 872965
Other names: A. maritima, ATCC BAA-2145, Ardenticatena maritima Kawaichi et al. 2013, DSM 23922, JCM 17282, KCTC 23289, NBRC 107679, filamentous thermophilic bacterium 110S, strain 110S
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