STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL88393.1Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (813 aa)    
Predicted Functional Partners:
KPL86287.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
KPL88683.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.967
bglX-3
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.
  
 0.868
KPL88445.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.860
KPL89351.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.814
KPL87247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.799
bglX
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.790
KPL87650.1
Cellobiose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.775
KPL88470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.766
bglX-2
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.766
Your Current Organism:
Ardenticatena maritima
NCBI taxonomy Id: 872965
Other names: A. maritima, ATCC BAA-2145, Ardenticatena maritima Kawaichi et al. 2013, DSM 23922, JCM 17282, KCTC 23289, NBRC 107679, filamentous thermophilic bacterium 110S, strain 110S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.