STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL87246.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase; Amylomaltase; acts to release glucose from maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
KPL87247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.558
KPL88301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.536
metH
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.535
KPL87248.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
KPL87249.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
KPL87250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
pabBC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.480
KPL87218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.425
KPL87244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.401
Your Current Organism:
Ardenticatena maritima
NCBI taxonomy Id: 872965
Other names: A. maritima, ATCC BAA-2145, Ardenticatena maritima Kawaichi et al. 2013, DSM 23922, JCM 17282, KCTC 23289, NBRC 107679, filamentous thermophilic bacterium 110S, strain 110S
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