STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN98525.1Zn-dependent peptidase ImmA, M78 family. (400 aa)    
Predicted Functional Partners:
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.783
SEN71999.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
 
  0.750
SEN98570.1
Hypothetical protein.
     
 0.747
SEO27117.1
Hypothetical protein.
     
 0.573
SEO22855.1
Two-component system, response regulator, stage 0 sporulation protein F.
    
  0.557
SEN69321.1
ABC-2 type transport system permease protein.
  
     0.462
SEO07127.1
Uridine kinase.
  
     0.442
SEN98784.1
Hypothetical protein.
     
 0.439
SEO91544.1
Hypothetical protein.
  
     0.438
SEN71736.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.