STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO00352.1D-xylose transport system substrate-binding protein. (357 aa)    
Predicted Functional Partners:
SEO00255.1
Ribose transport system substrate-binding protein.
 
 
 0.949
SEO00223.1
Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.940
SEO00190.1
Putative multiple sugar transport system ATP-binding protein.
 
 0.936
xylG
Xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.872
SEO00286.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.871
SEO00318.1
Two-component system, response regulator YesN.
 
     0.871
SEO26270.1
Xylose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.865
SEO00159.1
Putative multiple sugar transport system substrate-binding protein.
 
    
0.459
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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