STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO47989.1Zinc-uptake complex component A, substrate-binding. (146 aa)    
Predicted Functional Partners:
SEO47954.1
Zinc-uptake complex component A, substrate-binding.
     0.990
SEO70756.1
Zinc transport system permease protein.
 
 
 0.957
SEO70788.1
Zinc transport system ATP-binding protein.
 
 
 0.956
SEN92594.1
Iron/zinc/copper transport system permease protein.
 
 
 0.859
SEN92545.1
Iron/zinc/copper transport system ATP-binding protein.
 
 
 0.836
SEN92624.1
Iron/zinc/copper transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
   
 0.585
mntR
Iron (metal) dependent repressor, DtxR family; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
  
 
 0.572
SEO02834.1
Iron complex transport system ATP-binding protein.
    
 0.469
SEO13349.1
GTPase, G3E family.
  
  
 0.460
SEO13414.1
GTPase, G3E family.
  
  
 0.460
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.