STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO50644.1Protein of unknown function. (251 aa)    
Predicted Functional Partners:
SEO30463.1
Stage III sporulation protein AF.
  
     0.775
SEO30699.1
Conserved membrane protein YqhR.
  
     0.775
SEO85167.1
Hypothetical protein.
  
     0.775
SEO35172.1
Putative membrane protein, TIGR04086 family.
  
     0.774
SEO78636.1
Stage VI sporulation protein D.
  
     0.774
SEN42547.1
Stage VI sporulation protein F.
  
     0.773
SEO78702.1
Hypothetical protein.
  
     0.772
SEO91437.1
Ca-activated chloride channel family protein.
  
     0.772
SEO39372.1
Inhibitor of the pro-sigma K processing machinery.
  
     0.769
SEO30884.1
Protein YqhG of unknown function.
  
     0.766
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.