STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO48066.1Benzil reductase ((S)-benzoin forming). (252 aa)    
Predicted Functional Partners:
SEN47453.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.913
SEO85408.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.764
SEN85921.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.762
SEO48027.1
Cystathionine beta-lyase/cystathionine gamma-synthase.
   
   0.760
SEO03168.1
PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12).
     
 0.757
SEO06844.1
PTS system, beta-glucosides-specific IIC component.
     
 0.757
SEO13810.1
PTS system, beta-glucosides-specific IIC component.
     
 0.757
SEO26337.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
     
 0.757
SEO88011.1
PTS system, beta-glucosides-specific IIC component.
     
 0.757
SEO88078.1
PTS system, beta-glucosides-specific IIC component.
     
 0.757
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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