STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO57593.1Activator of the mannose operon, transcriptional antiterminator. (642 aa)    
Predicted Functional Partners:
SEO86674.1
PTS system, mannitol-specific IIC component.
 
 
 0.990
SEO57641.1
PTS system, fructose-specific IIC component.
 
 
 0.978
SEO58500.1
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
 
 
 0.944
SEN90872.1
PTS system, mannitol-specific IIC component.
 
 
 0.929
SEN90803.1
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.2).
 
 
 0.928
SEO86645.1
Mannitol-1-phosphate 5-dehydrogenase.
 
 
 0.804
mtlD
D-mannitol 1-phosphate 5-dehydrogenase.
 
 
 0.798
SEO57299.1
PTS system IIC component, L-Asc family (TC 4.A.7).
 
 
 0.793
SEO57264.1
PTS system, ascorbate-specific IIB component.
 
 
 0.764
SEO57232.1
PTS system, ascorbate-specific IIA component.
 
 0.762
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.