STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO57957.1Peptide/nickel transport system permease protein. (313 aa)    
Predicted Functional Partners:
SEO57912.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.992
SEO57878.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.988
SEO57993.1
Peptide/nickel transport system permease protein.
 
  0.968
SEO58035.1
Peptide/nickel transport system substrate-binding protein.
 
  0.934
SEO74799.1
Peptide/nickel transport system permease protein.
 
 
  0.882
SEO11658.1
Peptide/nickel transport system permease protein.
 
 
  0.880
SEO74443.1
Peptide/nickel transport system permease protein.
 
 
  0.879
SEO26813.1
Peptide/nickel transport system substrate-binding protein.
 
  0.875
SEO26898.1
Peptide/nickel transport system permease protein.
 
 
  0.875
SEO42525.1
Peptide/nickel transport system permease protein.
 
 
  0.870
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.