STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO69490.1ABC-2 type transport system permease protein. (420 aa)    
Predicted Functional Partners:
SEO69455.1
ABC-2 type transport system ATP-binding protein.
  
 0.971
SEN99350.1
ABC-2 type transport system ATP-binding protein.
  
 0.868
SEO69526.1
DNA repair exonuclease SbcCD nuclease subunit.
       0.529
SEO69559.1
Uncharacterized protein YhaN.
       0.524
SEO69589.1
DNA-binding transcriptional regulator GbsR, MarR family; Belongs to the GbsR family.
       0.509
SEO70464.1
Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family.
  
     0.450
SEN66867.1
ABC-2 type transport system ATP-binding protein.
 
  0.415
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.