STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO79433.1Fructosamine-3-kinase. (320 aa)    
Predicted Functional Partners:
SEN72405.1
GNAT acetyltransferase.
  
 
   0.666
SEO91501.1
Prenyltransferase and squalene oxidase repeat-containing protein.
  
     0.612
SEO33212.1
GNAT acetyltransferase.
  
 
   0.605
SEO01241.1
DNA-binding transcriptional regulator, MerR family.
 
     0.597
SEO70613.1
Acyl-CoA dehydrogenase.
  
 0.536
SEN71954.1
GNAT acetyltransferase.
  
 
   0.517
SEO79416.1
DNA-binding transcriptional regulator, MarR family.
       0.511
SEO16983.1
Multiple sugar transport system substrate-binding protein.
  
     0.508
SEO89519.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
     0.501
SEO63590.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
  
     0.499
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.