STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO80144.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SEO80174.1
Hypothetical protein.
       0.773
SEO80211.1
Hypothetical protein.
       0.773
SEO80247.1
Hypothetical protein.
       0.773
SEO80278.1
Hypothetical protein.
       0.773
SEO80312.1
Hypothetical protein.
       0.773
SEO80345.1
Hypothetical protein.
       0.773
SEO80385.1
Hypothetical protein.
       0.773
SEO80072.1
Hypothetical protein.
       0.619
SEO80103.1
Hypothetical protein.
       0.619
SEO80038.1
Hypothetical protein.
       0.604
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.